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cafferychen777 / mLLMCelltype

Cell type annotation for single-cell RNA-seq using multi-LLM consensus

Why this job: works in the areas we cover, but does not say which job it does

What it does

  • Multi-LLM Consensus. Integrates predictions from multiple LLMs to reduce single-model limitations and biases
  • Model Support. Compatible with 10+ LLM providers including OpenAI, Anthropic, Google, and others
  • Iterative Discussion. LLMs evaluate evidence and refine annotations through multiple rounds of discussion
  • Uncertainty Quantification. Provides Consensus Proportion and Shannon Entropy metrics to identify uncertain annotations
  • Cross-Model Validation. Reduces incorrect predictions through multi-model comparison

Get started

No single install command. Read the steps in the README (opens in new tab)

Maintenance
Active
Last commit 49 days ago
Stars
662
+1 this week
Licence
MIT
Allows business use
Downloads for
None listed
No release files
Latest version
v2.0.8
Released 2 months ago
Built with
Python
54% of the code

Is it looked after?

Contributors
Not stated
Last 90 days
Issues
72% closed
5 still open
Pull requests
56 merged
4 waiting
Releases
10
5 in the last year

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More: languages, topics, project record and preview image

Languages

  • Python 54%
  • R 25%
  • HTML 6%
  • TeX 5%

Topics

  • bioinformatics
  • cell-type-annotation
  • consensus-algorithm
  • large-language-models
  • llm
  • scanpy
  • seurat
  • single-cell
  • scrna
  • computational-biology
  • scrnaseq-analysis

Project record

  • JobOther AI tools
  • StatusListed
  • Commits525
  • Forks58
  • Watching22
  • Stars in 28 days+1
  • CreatedApr 7, 2025
  • First seen by usNov 7, 2026
  • CheckedNov 10, 2026

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