davisidarta / topometry
Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis
Why this job: matched by what the repo talks about: evaluate, learn, data, analysi
What it does
We approximate the Laplace–Beltrami operator (LBO) by learning well-weighted similarity graphs and their Laplacian/diffusion operators. The eigenfunctions of these operators form an orthonormal basis—the spectral scaffold—that captures the dataset’s intrinsic geometry across scales. This view connects to Diffusion Maps, Laplacian Eigenmaps, and related kernel eigenmaps, and enables downstream tasks such as clustering and graph-layout optimization with geometry preserved.
Get started
No single install command. Read the steps in the README (opens in new tab)
- Maintenance
- Active
- Last commit 39 days ago
- Stars
- 109
- On GitHub
- Licence
- MIT
- Allows business use
- Downloads for
- None listed
- No release files
- Latest version
- 1 releases
- None marked latest
- Built with
- Python
- 100% of the code
Is it looked after?
- Contributors
- Not stated
- Last 90 days
- Issues
- 31% closed
- 11 still open
- Pull requests
- 13 merged
- 0 waiting
- Releases
- 1
- 0 in the last year
- No contributing guide
- No security policy
- No code of conduct
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More: languages, topics and project record
Languages
- Python 100%
Topics
- clustering
- data-science
- data-visualization
- dimensionality-reduction
- graph
- graph-layout
- hypothesis-generation
- laplace-beltrami
- machine-learning
- manifold-learning
- scikit-learn
- scrnaseq
Project record
- JobEvals and observability
- StatusListed
- Commits389
- Forks6
- Watching5
- Stars in 28 days0
- CreatedApr 8, 2021
- First seen by usNov 7, 2026
- CheckedNov 8, 2026
