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davisidarta / topometry

Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis

Why this job: matched by what the repo talks about: evaluate, learn, data, analysi

What it does

We approximate the Laplace–Beltrami operator (LBO) by learning well-weighted similarity graphs and their Laplacian/diffusion operators. The eigenfunctions of these operators form an orthonormal basis—the spectral scaffold—that captures the dataset’s intrinsic geometry across scales. This view connects to Diffusion Maps, Laplacian Eigenmaps, and related kernel eigenmaps, and enables downstream tasks such as clustering and graph-layout optimization with geometry preserved.

Get started

No single install command. Read the steps in the README (opens in new tab)

Maintenance
Active
Last commit 39 days ago
Stars
109
On GitHub
Licence
MIT
Allows business use
Downloads for
None listed
No release files
Latest version
1 releases
None marked latest
Built with
Python
100% of the code

Is it looked after?

Contributors
Not stated
Last 90 days
Issues
31% closed
11 still open
Pull requests
13 merged
0 waiting
Releases
1
0 in the last year
  • No contributing guide
  • No security policy
  • No code of conduct

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More: languages, topics and project record

Languages

  • Python 100%

Topics

  • clustering
  • data-science
  • data-visualization
  • dimensionality-reduction
  • graph
  • graph-layout
  • hypothesis-generation
  • laplace-beltrami
  • machine-learning
  • manifold-learning
  • scikit-learn
  • scrnaseq

Project record

  • JobEvals and observability
  • StatusListed
  • Commits389
  • Forks6
  • Watching5
  • Stars in 28 days0
  • CreatedApr 8, 2021
  • First seen by usNov 7, 2026
  • CheckedNov 8, 2026

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