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MannLabs / alphapeptdeep

Deep learning framework for proteomics

Why this job: says: deep learning framework; topics: deep-learning, machine-learning

screenshot

What it does

AlphaPeptDeep (peptdeep for short) aims to easily build new deep learning models for shotgun proteomics studies. Transfer learning is also easy to apply using AlphaPeptDeep.

Get started

pip install peptdeep
Maintenance
Active
Last commit 3 months ago
Stars
161
On GitHub
Licence
Apache-2.0
Allows business use
Downloads for
3 systems
Mac, Windows, Linux
Latest version
v1.5.1
Released 3 months ago
Built with
Jupyter Notebook
90% of the code

Is it looked after?

Contributors
Not stated
Last 90 days
Issues
78% closed
22 still open
Pull requests
152 merged
5 waiting
Releases
35
4 in the last year
More: download files, languages, topics and project record

Download files, v1.5.1

  • Mac1 file, 9 downloads
  • Windows1 file, 48 downloads
  • Linux1 file, 9 downloads

All files on GitHub (opens in new tab)

Languages

  • Jupyter Notebook 90%
  • Python 9%
  • Shell <1%
  • Inno Setup <1%

Topics

  • deep-learning
  • hla
  • machine-learning
  • proteomics
  • python

Project record

  • JobAI libraries and models
  • StatusListed
  • Commits1,248
  • Forks27
  • Watching7
  • Stars in 28 days+1
  • CreatedOct 1, 2021
  • First seen by usNov 7, 2026
  • CheckedNov 8, 2026

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