rdk / p2rank
P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
Why this job: works in the areas we cover, but does not say which job it does
What it does
P2Rank is a stand-alone command-line program for fast and accurate prediction of ligand-binding sites from protein structures. It achieves high prediction success rates without relying on external software for computation of complex features or on a database of known protein-ligand templates.
Get started
No single install command. Read the steps in the README (opens in new tab)
- Maintenance
- Active
- Last commit 2 months ago
- Stars
- 475
- +1 this week
- Licence
- MIT
- Allows business use
- Downloads for
- None listed
- No release files
- Latest version
- 2.5.1
- Released 15 months ago
- Built with
- Groovy
- 79% of the code
Is it looked after?
- Contributors
- Not stated
- Last 90 days
- Issues
- 79% closed
- 15 still open
- Pull requests
- 7 merged
- 0 waiting
- Releases
- 16
- 1 in the last year
- No contributing guide
- No security policy
- No code of conduct
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| Acellera / moleculekit | 250 | 17 days ago | Custom | Mac, Linux |
More: languages, topics and project record
Languages
- Groovy 79%
- Java 14%
- Shell 6%
- Promela 1%
Topics
- bioinformatics
- machine-learning
- protein-structure
- pdb
- binding-sites
- proteins
- structural-bioinformatics
- java
- mmcif
- pymol
- groovy
- protein-ligand-docking
Project record
- JobOther AI tools
- StatusListed
- Commits2,151
- Forks66
- Watching7
- Stars in 28 days+8
- CreatedSep 25, 2016
- First seen by usNov 7, 2026
- CheckedNov 8, 2026