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vijaymasand / PyChem-Pro

PyChem-Pro: 100% Python API, fast, flexible & programmable molecular viewer - 2D and 3D, molecular docking pose viewer, cheminformatics library, molecular descriptor calculator, molecular editor, chemical drawing editor, QSAR model developer, and many more...

Why this job: works in the areas we cover, but does not say which job it does

Chemical Space Visualization

What it does

  • SMILES parser with Huckel aromaticity perception, stereochemistry, bracketed atoms, radicals
  • PDB / PDBx / mmCIF / PDBQT / MOL / MOL2 / SDF file readers with automatic bond detection and CONECT parsing
  • PDBQT support for small and large molecules
  • 3D coordinate generation from molecular topology (BFS + force-field relaxation)
  • MMFF94 force field with hydrogen addition, bond stretching, angle bending, torsion, Van der Waals, and BCI partial charge assignment

Get started

pip install packaging pandas scipy scikit-learn matplotlib rdkit

You need: Operating System: Windows 10/11, macOS 12+, or any Linux distribution with Qt 6 support (Ubuntu 22.04+, Fedora 37+, Arch, etc.); Python: 3.10 or newer; RAM: 4 GB minimum, 8 GB recommended for large proteins (>5000 atoms)

Maintenance
Active
Last commit 25 days ago
Stars
403
+2 this week
Licence
Custom
Read before business use
Downloads for
None listed
No release files
Latest version
v1.0.0
Released 4 months ago
Built with
Python
100% of the code

Is it looked after?

Contributors
Not stated
Last 90 days
Issues
50% closed
1 still open
Pull requests
1 merged
0 waiting
Releases
1
1 in the last year
  • No contributing guide
  • No security policy
  • No code of conduct

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More: languages, topics and project record

Languages

  • Python 100%
  • Shell <1%
  • Batchfile <1%

Topics

  • cheminformatics
  • chemistry-drawing
  • machine-learning
  • molecular-viewer
  • qsar
  • chemical-editor
  • chemical-space-plot
  • bioinformatics
  • drug-discovery
  • molecular-descriptors
  • molecular-docking

Project record

  • JobOther AI tools
  • StatusListed
  • Commits292
  • Forks15
  • Watching2
  • Stars in 28 days+9
  • CreatedApr 7, 2026
  • First seen by usNov 7, 2026
  • CheckedNov 8, 2026

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