zeiss-microscopy / OAD
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
Why this job: works in the areas we cover, but does not say which job it does
What it does
- Open Application Development (OAD) uses powerful Python Scripts to simplify, customize and automate your workflows.
- Analyze and Exchange data with applications like Fiji, Python, Knime, CellProfiler, Icy, MATLAB, Excel and …
- API for reading and writing CZI image data using custom software
- BioFormats Import as a module inside ZEN Blue as well as OME-TIFF Export
- Create “smart” experiments with Experiment Feedback and modify the acquisition On-the-fly based on Online Image Analysis and External Inputs
Get started
No single install command. Read the steps in the README (opens in new tab)
- Maintenance
- Active
- Last commit 13 days ago
- Stars
- 174
- On GitHub
- Licence
- GPL-3.0
- Share-alike terms
- Downloads for
- None listed
- No release files
- Latest tag
- zen-api-utils-v0.1.0
- Released 13 days ago
- Built with
- HTML
- 91% of the code
Is it looked after?
- Contributors
- Not stated
- Last 90 days
- Issues
- 100% closed
- 0 still open
- Pull requests
- 85 merged
- 0 waiting
- Releases
- 4
- 4 in the last year
- No contributing guide
- No security policy
- No code of conduct
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More: languages, topics and project record
Languages
- HTML 91%
- Python 6%
- Jupyter Notebook 4%
- JavaScript <1%
Topics
- acquisition
- automation
- image-analysis
- image-processing
- imaging
- machine-learning
- microscopy
- oad
- open-source
- python
- python-script
- scripting
Project record
- JobOther AI tools
- StatusListed
- Commits507
- Forks56
- Watching20
- Stars in 28 days+1
- CreatedOct 27, 2018
- First seen by usNov 7, 2026
- CheckedNov 8, 2026